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1.
Nat Methods ; 20(12): 2048-2057, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-38012321

RESUMO

To increase granularity in human neuroimaging science, we designed and built a next-generation 7 Tesla magnetic resonance imaging scanner to reach ultra-high resolution by implementing several advances in hardware. To improve spatial encoding and increase the image signal-to-noise ratio, we developed a head-only asymmetric gradient coil (200 mT m-1, 900 T m-1s-1) with an additional third layer of windings. We integrated a 128-channel receiver system with 64- and 96-channel receiver coil arrays to boost signal in the cerebral cortex while reducing g-factor noise to enable higher accelerations. A 16-channel transmit system reduced power deposition and improved image uniformity. The scanner routinely performs functional imaging studies at 0.35-0.45 mm isotropic spatial resolution to reveal cortical layer functional activity, achieves high angular resolution in diffusion imaging and reduces acquisition time for both functional and structural imaging.


Assuntos
Encéfalo , Imageamento por Ressonância Magnética , Humanos , Encéfalo/diagnóstico por imagem , Encéfalo/patologia , Imageamento por Ressonância Magnética/métodos , Cabeça , Neuroimagem , Razão Sinal-Ruído
2.
Magn Reson Med ; 90(6): 2592-2607, 2023 12.
Artigo em Inglês | MEDLINE | ID: mdl-37582214

RESUMO

PURPOSE: A 128-channel receive-only array for brain imaging at 7 T was simulated, designed, constructed, and tested within a high-performance head gradient designed for high-resolution functional imaging. METHODS: The coil used a tight-fitting helmet geometry populated with 128 loop elements and preamplifiers to fit into a 39 cm diameter space inside a built-in gradient. The signal-to-noise ratio (SNR) and parallel imaging performance (1/g) were measured in vivo and simulated using electromagnetic modeling. The histogram of 1/g factors was analyzed to assess the range of performance. The array's performance was compared to the industry-standard 32-channel receive array and a 64-channel research array. RESULTS: It was possible to construct the 128-channel array with body noise-dominated loops producing an average noise correlation of 5.4%. Measurements showed increased sensitivity compared with the 32-channel and 64-channel array through a combination of higher intrinsic SNR and g-factor improvements. For unaccelerated imaging, the 128-channel array showed SNR gains of 17.6% and 9.3% compared to the 32-channel and 64-channel array, respectively, at the center of the brain and 42% and 18% higher SNR in the peripheral brain regions including the cortex. For R = 5 accelerated imaging, these gains were 44.2% and 24.3% at the brain center and 86.7% and 48.7% in the cortex. The 1/g-factor histograms show both an improved mean and a tighter distribution by increasing the channel count, with both effects becoming more pronounced at higher accelerations. CONCLUSION: The experimental results confirm that increasing the channel count to 128 channels is beneficial for 7T brain imaging, both for increasing SNR in peripheral brain regions and for accelerated imaging.


Assuntos
Encéfalo , Imageamento por Ressonância Magnética , Imageamento por Ressonância Magnética/métodos , Encéfalo/diagnóstico por imagem , Razão Sinal-Ruído , Imagens de Fantasmas , Neuroimagem/métodos , Desenho de Equipamento
3.
Magn Reson Med ; 90(2): 784-801, 2023 08.
Artigo em Inglês | MEDLINE | ID: mdl-37052387

RESUMO

PURPOSE: Peripheral nerve stimulation (PNS) limits the image encoding performance of both body gradient coils and the latest generation of head gradients. We analyze a variety of head gradient design aspects using a detailed PNS model to guide the design process of a new high-performance asymmetric head gradient to raise PNS thresholds and maximize the usable image-encoding performance. METHODS: A novel three-layer coil design underwent PNS optimization involving PNS predictions of a series of candidate designs. The PNS-informed design process sought to maximize the usable parameter space of a coil with <10% nonlinearity in a 22 cm region of linearity, a relatively large inner diameter (44 cm), maximum gradient amplitude of 200 mT/m, and a high slew rate of 900 T/m/s. PNS modeling allowed identification and iterative adjustment of coil features with beneficial impact on PNS such as the number of winding layers, shoulder accommodation strategy, and level of asymmetry. PNS predictions for the final design were compared to measured thresholds in a constructed prototype. RESULTS: The final head gradient achieved up to 2-fold higher PNS thresholds than the initial design without PNS optimization and compared to existing head gradients with similar design characteristics. The inclusion of a third intermediate winding layer provided the additional degrees of freedom necessary to improve PNS thresholds without significant sacrifices to the other design metrics. CONCLUSION: Augmenting the design phase of a new high-performance head gradient coil by PNS modeling dramatically improved the usable image-encoding performance by raising PNS thresholds.


Assuntos
Imageamento por Ressonância Magnética , Nervos Periféricos , Imageamento por Ressonância Magnética/métodos , Nervos Periféricos/diagnóstico por imagem , Nervos Periféricos/fisiologia , Desenho de Equipamento
4.
Front Psychol ; 12: 690198, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34354635

RESUMO

Speed-accuracy tradeoff (SAT) theory dictates that decisions can be made more quickly by sacrificing accuracy. Here we investigate whether the human brain can operate in a brief metabolic overdrive to overcome SAT and successfully make decisions requiring both high levels of speed and accuracy. In the context of BOLD fMRI we expect "a brief metabolic overdrive" to involve an increase in cerebral oxygen metabolism prior to increased cerebral blood flow-a phenomenon known as the "initial dip" which results from a sudden drop in oxyhemoglobin in perfusing blood. Human subjects performed a motion discrimination task consisting of different difficulties while emphasizing either accuracy (i.e., without time pressure) or both speed and accuracy (i.e., with time pressure). Using simultaneous multi-slice fMRI, for very fast (333 ms) measurement of whole brain BOLD activity, revealed two modes of physiological overdrive responses when subjects emphasized both speed and accuracy. The majority of subjects exhibited the hypothesized enhancement of initial dip amplitude in posterior visual cortex (PVC) with the size of the enhancement significantly correlated with improvement in behavioral performance. For these subjects, the traditionally analyzed post-stimulus overshoot was not affected by task emphasis. These results demonstrate the complexity and variability of the BOLD hemodynamic response. The discovered relationships between BOLD response and behavior were only observed when subjects emphasized both speed and accuracy in more difficult trials suggesting that the brain can perform in a state of metabolic overdrive with enhanced neural processing of sensory information specifically in challenging situations.

5.
Magn Reson Med ; 85(5): 2490-2506, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-33231890

RESUMO

PURPOSE: To achieve highly accelerated submillimeter resolution T2 -weighted functional MRI at 7T by developing a three-dimensional gradient and spin echo imaging (GRASE) with inner-volume selection and variable flip angles (VFA). METHODS: GRASE imaging has disadvantages in that (a) k-space modulation causes T2 blurring by limiting the number of slices and (b) a VFA scheme results in partial success with substantial SNR loss. In this work, accelerated GRASE with controlled T2 blurring is developed to improve a point spread function (PSF) and temporal signal-to-noise ratio (tSNR) with a large number of slices. To this end, the VFA scheme is designed by minimizing a trade-off between SNR and blurring for functional sensitivity, and a new GRASE-optimized random encoding, which takes into account the complex signal decays of T2 and T2∗ weightings, is proposed by achieving incoherent aliasing for constrained reconstruction. Numerical and experimental studies were performed to validate the effectiveness of the proposed method over regular and VFA GRASE (R- and V-GRASE). RESULTS: The proposed method, while achieving 0.8 mm isotropic resolution, functional MRI compared to R- and V-GRASE improves the spatial extent of the excited volume up to 36 slices with 52%-68% full width at half maximum (FWHM) reduction in PSF but approximately 2- to 3-fold mean tSNR improvement, thus resulting in higher BOLD activations. CONCLUSIONS: We successfully demonstrated the feasibility of the proposed method in T2 -weighted functional MRI. The proposed method is especially promising for cortical layer-specific functional MRI.


Assuntos
Encéfalo , Imageamento Tridimensional , Encéfalo/diagnóstico por imagem , Estudos de Viabilidade , Imageamento por Ressonância Magnética , Razão Sinal-Ruído
6.
Magn Reson Med ; 84(6): 3128-3145, 2020 12.
Artigo em Inglês | MEDLINE | ID: mdl-32557752

RESUMO

PURPOSE: Functional MRI (fMRI) at the mesoscale of cortical layers and columns requires both sensitivity and specificity, the latter of which can be compromised if the imaging method is affected by vascular artifacts, particularly cortical draining veins at the pial surface. Recent studies have shown that cerebral blood volume (CBV) imaging is more specific to the actual laminar locus of neural activity than BOLD imaging using standard gradient-echo EPI sequences. Gradient and spin-echo (GRASE) BOLD imaging has also shown greater specificity when compared with standard gradient-echo EPI BOLD. Here we directly compare CBV and BOLD contrasts in high-resolution imaging of the primary motor cortex for laminar functional MRI in four combinations of signal labeling, CBV using slice-selective slab-inversion vascular space occupancy (VASO) and BOLD, each with 3D gradient-echo EPI and zoomed 3D-GRASE image readouts. METHODS: Activations were measured using each sequence and contrast combination during a motor task. Activation profiles across cortical depth were measured to assess the sensitivity and specificity (pial bias) of each method. RESULTS: Both CBV imaging using gradient-echo 3D-EPI and BOLD imaging using 3D-GRASE show similar specificity and sensitivity and are therefore useful tools for mesoscopic functional MRI in the human cortex. The combination of GRASE and VASO did not demonstrate high levels of sensitivity, nor show increased specificity. CONCLUSION: Three-dimensional EPI with VASO contrast and 3D-GRASE with BOLD contrast both demonstrate sufficient sensitivity and specificity for laminar functional MRI to be used by neuroscientists in a wide range of investigations of depth-dependent neural circuitry in the human brain.


Assuntos
Mapeamento Encefálico , Volume Sanguíneo Cerebral , Encéfalo , Circulação Cerebrovascular , Humanos , Imageamento Tridimensional , Imageamento por Ressonância Magnética
7.
IEEE Trans Med Imaging ; 39(3): 742-752, 2020 03.
Artigo em Inglês | MEDLINE | ID: mdl-31403409

RESUMO

This work develops a novel, simultaneous multi-VENC and simultaneous multi-slice (SMV+SMS) imaging in a single acquisition for robust phase contrast (PC) MRI. To this end, the pulse sequence was designed to permit concurrent acquisition of multiple VENCs as well as multiple slices on a shared frequency encoding gradient, in which each effective echo time for multiple VENCs was controlled by adjusting net gradient area while multiple slices were simultaneously excited by employing multiband resonance frequency (RF) pulses. For VENC and slice separation, RF phase cycling and gradient blip were applied to create both inter-VENC and inter-slice shifts along phase encoding direction, respectively. With an alternating RF phase cycling that generates oscillating steady-state with low and high signal amplitude, the acquired multi-VENC k-space was reformulated into 3D undersampled k-space by generating a virtual dimension along VENC direction for modulation induced artifact reduction. In vivo studies were conducted to validate the feasibility of the proposed method in comparison with conventional PC MRI. The proposed method shows comparable performance to the conventional method in delineating both low and high flow velocities across cardiac phases with high spatial coverage without apparent artifacts. In the presence of high flow velocity that is above the VENC value, the proposed method exhibits clear depiction of flow signals over conventional method, thereby leading to high VNR image with improved velocity dynamic range.


Assuntos
Velocidade do Fluxo Sanguíneo , Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Artefatos , Circulação Sanguínea , Humanos
8.
Magn Reson Med ; 82(1): 377-386, 2019 07.
Artigo em Inglês | MEDLINE | ID: mdl-30883901

RESUMO

PURPOSE: To develop a novel, simultaneous multi-slice (SMS) reconstruction that extends an inter-slice leakage constraint to intra-slice aliasing with a virtual slice concept for artifact reduction. METHODS: Inter-slice leakage constraint has been used for SMS reconstruction that mitigates leakage artifacts from the adjacent slices. In this work, the leakage constraint is extended to more general framework that includes SMS and parallel MRI as special cases by viewing intra-slice aliasing artifacts from undersampling as virtual slices while imposing data fidelity to ensure the measurement consistency. In this way, the reconstruction makes it feasible to directly estimate the individual slices from the undersampled SMS acquisition as a one-step method. The performance of the extended method is evaluated with data acquired using 2D GRE and EPI sequences. RESULTS: Compared to a two-step method that performs slice unaliasing followed by inplane unaliasing, the proposed one-step method reduces aliasing artifacts by employing the extended leakage constraint while lowering the noise amplification by improving the conditioning for the inverse problem. CONCLUSIONS: The proposed one-step method takes advantage of virtual slices as additional encoding power for improved image quality. We successfully demonstrated that the proposed one-step method minimizes a trade-off between aliasing artifacts and amplified noises over the two-step method.


Assuntos
Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Algoritmos , Artefatos , Encéfalo/diagnóstico por imagem , Humanos
9.
Neuroimage ; 164: 155-163, 2018 01 01.
Artigo em Inglês | MEDLINE | ID: mdl-28213116

RESUMO

Encoding higher spatial resolution in simultaneous multi-slice (SMS) EPI is highly dependent on gradient performance, high density receiver coil arrays and pulse sequence optimization. We simulate gradient amplitude and slew rate determination of EPI imaging performance in terms of minimum TE, echo spacing (ES) and spatial resolution. We discuss the effects of image zooming in pulse sequences that have been used for sub-millimeter resolutions and the trade-offs in using partial Fourier and parallel imaging to reduce TE, PSF and ES. Using optimizations for SMS EPI pulse sequences with available gradient and receiver hardware, experimental results in ultra-high resolution (UHR) (0.45-0.5mm isotropic) SMS-EPI fMRI and mapping ocular dominance columns (ODC) in human brain at 0.5 mm isotropic resolution are demonstrated. We discuss promising future directions of UHR fMRI.


Assuntos
Mapeamento Encefálico/métodos , Encéfalo/diagnóstico por imagem , Imagem Ecoplanar/métodos , Processamento de Imagem Assistida por Computador/métodos , Algoritmos , Encéfalo/fisiologia , Dominância Ocular/fisiologia , Humanos , Imageamento Tridimensional/métodos
10.
Neuroimage ; 164: 164-171, 2018 01 01.
Artigo em Inglês | MEDLINE | ID: mdl-28185951

RESUMO

High isotropic resolution fMRI is challenging primarily due to long repetition times (TR) and insufficient SNR, especially at lower field strengths. Recently, Simultaneous Multi-Slice (SMS) imaging with blipped-CAIPI has substantially reduced scan time and improved SNR efficiency of fMRI. Similarly, super-resolution techniques utilizing sub- voxel spatial shifts in the slice direction have increased both resolution and SNR efficiency. Here we demonstrate the synergistic combination of SLIce Dithered Enhanced Resolution (SLIDER) and SMS for high-resolution, high-SNR whole brain fMRI in comparison to standard resolution fMRI data as well as high-resolution data. With SLIDER-SMS, high spatial frequency information is recovered (unaliased) even in absence of super-resolution deblurring algorithms. Additionally we find that BOLD CNR (as measured by t-value in a visual checkerboard paradigm) is improved by as much as 100% relative to traditionally acquired high- resolution data. Using this gain in CNR, we are able to obtain unprecedented nominally isotropic resolutions at 3T (0.66 mm) and 7T (0.45 mm).


Assuntos
Mapeamento Encefálico/métodos , Encéfalo/diagnóstico por imagem , Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Humanos , Aumento da Imagem/métodos
11.
NMR Biomed ; 29(9): 1198-221, 2016 09.
Artigo em Inglês | MEDLINE | ID: mdl-26835884

RESUMO

Ultra-high-field MRI provides large increases in signal-to-noise ratio (SNR) as well as enhancement of several contrast mechanisms in both structural and functional imaging. Combined, these gains result in a substantial boost in contrast-to-noise ratio that can be exploited for higher-spatial-resolution imaging to extract finer-scale information about the brain. With increased spatial resolution, however, there is a concurrent increased image-encoding burden that can cause unacceptably long scan times for structural imaging and slow temporal sampling of the hemodynamic response in functional MRI - particularly when whole-brain imaging is desired. To address this issue, new directions of imaging technology development - such as the move from conventional 2D slice-by-slice imaging to more efficient simultaneous multislice (SMS) or multiband imaging (which can be viewed as "pseudo-3D" encoding) as well as full 3D imaging - have provided dramatic improvements in acquisition speed. Such imaging paradigms provide higher SNR efficiency as well as improved encoding efficiency. Moreover, SMS and 3D imaging can make better use of coil sensitivity information in multichannel receiver arrays used for parallel imaging acquisitions through controlled aliasing in multiple spatial directions. This has enabled unprecedented acceleration factors of an order of magnitude or higher in these imaging acquisition schemes, with low image artifact levels and high SNR. Here we review the latest developments of SMS and 3D imaging methods and related technologies at ultra-high field for rapid high-resolution functional and structural imaging of the brain. Copyright © 2016 John Wiley & Sons, Ltd.


Assuntos
Artefatos , Encéfalo/anatomia & histologia , Aumento da Imagem/métodos , Imageamento Tridimensional/métodos , Imageamento por Ressonância Magnética/métodos , Processamento de Sinais Assistido por Computador , Algoritmos , Humanos , Interpretação de Imagem Assistida por Computador/métodos , Campos Magnéticos , Doses de Radiação , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
12.
Neuroimage ; 122: 281-7, 2015 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-26241682

RESUMO

Cerebrospinal fluid (CSF) dynamics have been mostly studied with cardiac-gated phase contrast MRI combining signal from many cardiac cycles to create cine-phase sampling of one time-averaged cardiac cycle. The relative effects of cardiac and respiratory changes on CSF movement are not well understood. There is possible respiration-driven movement of CSF in ventricles, cisterns, and subarachnoid spaces which has not been characterized with velocity measurements. To date, commonly used cine-phase contrast techniques of velocity imaging inherently cannot detect respiratory velocity changes since cardiac-gated data acquired over several minutes randomizes respiratory phase contributions. We have developed an extremely fast, real-time, and quantitative MRI technique to image CSF velocity in simultaneous multi-slice (SMS) echo planar imaging (EPI) acquisitions of 3 or 6 slice levels simultaneously over 30s and observe 3D spatial distributions of CSF velocity. Measurements were made in 10 subjects utilizing a respiratory belt to record respiratory phases and visual cues to instruct subjects on breathing rates. A protocol is able to measure velocity within regions of brain and basal cisterns covered with 24 axial slices in 4 minutes, repeated for 3 velocity directions. These measurements were performed throughout the whole brain, rather than in selected line regions so that a global view of CSF dynamics could be visualized. Observations of cardiac and breathing-driven CSF dynamics show bidirectional respiratory motion occurs primarily along the central axis through the basal cisterns and intraventricular passageways and to a lesser extent in the peripheral Sylvian fissure with little CSF motion present in subarachnoid spaces. During inspiration phase, there is upward (inferior to superior) CSF movement into the cranial cavity and lateral ventricles and a reversal of direction in expiration phase.


Assuntos
Encéfalo/fisiologia , Técnicas de Imagem de Sincronização Cardíaca/métodos , Líquido Cefalorraquidiano/fisiologia , Imagem Ecoplanar/métodos , Respiração , Ventrículos Cerebrais/fisiologia , Humanos , Processamento de Imagem Assistida por Computador , Processamento de Sinais Assistido por Computador
13.
Front Neurosci ; 9: 163, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25999810

RESUMO

Functional magnetic resonance imaging (fMRI) allows studying human brain function non-invasively up to the spatial resolution of cortical columns and layers. Most fMRI acquisitions rely on the blood oxygenation level dependent (BOLD) contrast employing T(*) 2 weighted 2D multi-slice echo-planar imaging (EPI). At ultra-high magnetic field (i.e., 7 T and above), it has been shown experimentally and by simulation, that T2 weighted acquisitions yield a signal that is spatially more specific to the site of neuronal activity at the cost of functional sensitivity. This study compared two T2 weighted imaging sequences, inner-volume 3D Gradient-and-Spin-Echo (3D-GRASE) and 2D Spin-Echo EPI (SE-EPI), with evaluation of their imaging point-spread function (PSF), functional specificity, and functional sensitivity at sub-millimeter resolution. Simulations and measurements of the imaging PSF revealed that the strongest anisotropic blurring in 3D-GRASE (along the second phase-encoding direction) was about 60% higher than the strongest anisotropic blurring in 2D SE-EPI (along the phase-encoding direction). In a visual paradigm, the BOLD sensitivity of 3D-GRASE was found to be superior due to its higher temporal signal-to-noise ratio (tSNR). High resolution cortical depth profiles suggested that the contrast mechanisms are similar between the two sequences, however, 2D SE-EPI had a higher surface bias owing to the higher T(*) 2 contribution of the longer in-plane EPI echo-train for full field of view compared to the reduced field of view of zoomed 3D-GRASE.

14.
Neuroimage ; 102 Pt 2: 358-69, 2014 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-25038435

RESUMO

The magnocellular (M) and parvocellular (P) subdivisions of primate LGN are known to process complementary types of visual stimulus information, but a method for noninvasively defining these subdivisions in humans has proven elusive. As a result, the functional roles of these subdivisions in humans have not been investigated physiologically. To functionally map the M and P subdivisions of human LGN, we used high-resolution fMRI at high field (7 T and 3 T) together with a combination of spatial, temporal, luminance, and chromatic stimulus manipulations. We found that stimulus factors that differentially drive magnocellular and parvocellular neurons in primate LGN also elicit differential BOLD fMRI responses in human LGN and that these responses exhibit a spatial organization consistent with the known anatomical organization of the M and P subdivisions. In test-retest studies, the relative responses of individual voxels to M-type and P-type stimuli were reliable across scanning sessions on separate days and across sessions at different field strengths. The ability to functionally identify magnocellular and parvocellular regions of human LGN with fMRI opens possibilities for investigating the functions of these subdivisions in human visual perception, in patient populations with suspected abnormalities in one of these subdivisions, and in visual cortical processing streams arising from parallel thalamocortical pathways.


Assuntos
Corpos Geniculados/fisiologia , Percepção Visual/fisiologia , Adulto , Mapeamento Encefálico , Sensibilidades de Contraste/fisiologia , Feminino , Humanos , Imageamento por Ressonância Magnética , Masculino , Estimulação Luminosa , Percepção Espacial/fisiologia
15.
Magn Reson Med ; 70(6): 1500-6, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-24130105

RESUMO

PURPOSE: Simultaneous multi-slice (SMS) echo planar imaging (EPI) is incorporated into two-dimensional (2D) arterial spin labeling (ASL) imaging to produce more slices for measuring perfusion in a larger region of the brain than currently possible with multi-slice EPI. METHODS: Pulsed ASL (PASL) preparations using FAIR and QUIPSS II techniques were combined with SMS-EPI. Testing was performed in four subjects at 3 Tesla. Multiband slice acceleration factors (MB) from MB-2 to MB-5 using 40 averages were evaluated. Comparisons were made quantitatively to PASL 2D EPI and qualitatively to PASL 3D GRASE. RESULTS: In the 12 slice data set, spatial SNR for the perfusion weighted images averaged across subjects was 3.28 and 3.44 for the two sequential MB-1 acquisitions as control comparison, 3.25 for MB-2 and 2.98 for MB-3. The temporal SNR averaged 1.01 and 0.99 for MB-1, 0.89 for MB-2, and 0.78 for MB-3. For whole-brain spatial coverage, the 20 slice data sets could be acquired in narrower time windows, from 874 ms using EPI (MB-1) down to 196 ms using MB-5. SMS-EPI ASL differed from 3D GRASE ASL, which can use background suppression and has less susceptibility artifact as a CPMG SE sequence. CONCLUSION: SMS-EPI has a major advantage over EPI-based ASL imaging by increasing slice coverage without lengthening the acquisition time window.


Assuntos
Algoritmos , Artérias Cerebrais/anatomia & histologia , Artérias Cerebrais/fisiologia , Circulação Cerebrovascular/fisiologia , Imagem Ecoplanar/métodos , Interpretação de Imagem Assistida por Computador/métodos , Angiografia por Ressonância Magnética/métodos , Velocidade do Fluxo Sanguíneo/fisiologia , Humanos , Aumento da Imagem/métodos , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
16.
Neuroimage ; 83: 991-1001, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23899722

RESUMO

We evaluate residual aliasing among simultaneously excited and acquired slices in slice accelerated multiband (MB) echo planar imaging (EPI). No in-plane accelerations were used in order to maximize and evaluate achievable slice acceleration factors at 3 T. We propose a novel leakage (L-) factor to quantify the effects of signal leakage between simultaneously acquired slices. With a standard 32-channel receiver coil at 3 T, we demonstrate that slice acceleration factors of up to eight (MB=8) with blipped controlled aliasing in parallel imaging (CAIPI), in the absence of in-plane accelerations, can be used routinely with acceptable image quality and integrity for whole brain imaging. Spectral analyses of single-shot fMRI time series demonstrate that temporal fluctuations due to both neuronal and physiological sources were distinguishable and comparable up to slice-acceleration factors of nine (MB=9). The increased temporal efficiency could be employed to achieve, within a given acquisition period, higher spatial resolution, increased fMRI statistical power, multiple TEs, faster sampling of temporal events in a resting state fMRI time series, increased sampling of q-space in diffusion imaging, or more quiet time during a scan.


Assuntos
Algoritmos , Mapeamento Encefálico/métodos , Encéfalo/fisiologia , Imagem Ecoplanar/métodos , Interpretação de Imagem Assistida por Computador/métodos , Humanos
17.
Neuroimage ; 80: 144-68, 2013 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-23702415

RESUMO

Resting-state functional magnetic resonance imaging (rfMRI) allows one to study functional connectivity in the brain by acquiring fMRI data while subjects lie inactive in the MRI scanner, and taking advantage of the fact that functionally related brain regions spontaneously co-activate. rfMRI is one of the two primary data modalities being acquired for the Human Connectome Project (the other being diffusion MRI). A key objective is to generate a detailed in vivo mapping of functional connectivity in a large cohort of healthy adults (over 1000 subjects), and to make these datasets freely available for use by the neuroimaging community. In each subject we acquire a total of 1h of whole-brain rfMRI data at 3 T, with a spatial resolution of 2×2×2 mm and a temporal resolution of 0.7s, capitalizing on recent developments in slice-accelerated echo-planar imaging. We will also scan a subset of the cohort at higher field strength and resolution. In this paper we outline the work behind, and rationale for, decisions taken regarding the rfMRI data acquisition protocol and pre-processing pipelines, and present some initial results showing data quality and example functional connectivity analyses.


Assuntos
Encéfalo/anatomia & histologia , Encéfalo/fisiologia , Conectoma/métodos , Imageamento por Ressonância Magnética/métodos , Modelos Anatômicos , Modelos Neurológicos , Descanso/fisiologia , Humanos , Rede Nervosa/anatomia & histologia , Rede Nervosa/fisiologia
18.
Neuroimage ; 80: 125-43, 2013 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-23702418

RESUMO

The Human Connectome Project (HCP) is a collaborative 5-year effort to map human brain connections and their variability in healthy adults. A consortium of HCP investigators will study a population of 1200 healthy adults using multiple imaging modalities, along with extensive behavioral and genetic data. In this overview, we focus on diffusion MRI (dMRI) and the structural connectivity aspect of the project. We present recent advances in acquisition and processing that allow us to obtain very high-quality in-vivo MRI data, whilst enabling scanning of a very large number of subjects. These advances result from 2 years of intensive efforts in optimising many aspects of data acquisition and processing during the piloting phase of the project. The data quality and methods described here are representative of the datasets and processing pipelines that will be made freely available to the community at quarterly intervals, beginning in 2013.


Assuntos
Encéfalo/anatomia & histologia , Encéfalo/fisiologia , Conectoma/tendências , Imagem de Tensor de Difusão/tendências , Modelos Anatômicos , Modelos Neurológicos , Humanos , Rede Nervosa/anatomia & histologia , Rede Nervosa/fisiologia
19.
Neuroimage ; 80: 80-104, 2013 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-23702417

RESUMO

The Human Connectome Project (HCP) relies primarily on three complementary magnetic resonance (MR) methods. These are: 1) resting state functional MR imaging (rfMRI) which uses correlations in the temporal fluctuations in an fMRI time series to deduce 'functional connectivity'; 2) diffusion imaging (dMRI), which provides the input for tractography algorithms used for the reconstruction of the complex axonal fiber architecture; and 3) task based fMRI (tfMRI), which is employed to identify functional parcellation in the human brain in order to assist analyses of data obtained with the first two methods. We describe technical improvements and optimization of these methods as well as instrumental choices that impact speed of acquisition of fMRI and dMRI images at 3T, leading to whole brain coverage with 2 mm isotropic resolution in 0.7 s for fMRI, and 1.25 mm isotropic resolution dMRI data for tractography analysis with three-fold reduction in total dMRI data acquisition time. Ongoing technical developments and optimization for acquisition of similar data at 7 T magnetic field are also presented, targeting higher spatial resolution, enhanced specificity of functional imaging signals, mitigation of the inhomogeneous radio frequency (RF) fields, and reduced power deposition. Results demonstrate that overall, these approaches represent a significant advance in MR imaging of the human brain to investigate brain function and structure.


Assuntos
Encéfalo/anatomia & histologia , Encéfalo/fisiologia , Conectoma/métodos , Imagem de Difusão por Ressonância Magnética/métodos , Modelos Neurológicos , Rede Nervosa/anatomia & histologia , Rede Nervosa/fisiologia , Animais , Humanos , Aumento da Imagem/métodos , Modelos Anatômicos , Análise Espaço-Temporal
20.
J Magn Reson ; 229: 90-100, 2013 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-23473893

RESUMO

The recent advancement of simultaneous multi-slice imaging using multiband excitation has dramatically reduced the scan time of the brain. The evolution of this parallel imaging technique began over a decade ago and through recent sequence improvements has reduced the acquisition time of multi-slice EPI by over ten fold. This technique has recently become extremely useful for (i) functional MRI studies improving the statistical definition of neuronal networks, and (ii) diffusion based fiber tractography to visualize structural connections in the human brain. Several applications and evaluations are underway which show promise for this family of fast imaging sequences.


Assuntos
Encéfalo/anatomia & histologia , Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Algoritmos , Animais , Imagem de Difusão por Ressonância Magnética , Imagem Ecoplanar/instrumentação , Imagem Ecoplanar/métodos , Campos Eletromagnéticos , Humanos , Imageamento por Ressonância Magnética/instrumentação , Imageamento por Ressonância Magnética/tendências , Vias Neurais/anatomia & histologia
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